Package index • hgnc.mcp

Overview

Package overview and introduction

hgnc.mcp-package hgnc.mcp: MCP Server for HGNC Gene Nomenclature Resources

Data Management

Functions for downloading, caching, and managing HGNC data

load_hgnc_data(): Get HGNC cache directory
download_hgnc_data(): Get HGNC cache directory
get_hgnc_cache_info(): Get HGNC cache directory
is_hgnc_cache_fresh(): Get HGNC cache directory
get_hgnc_cache_dir(): Get HGNC cache directory
clear_hgnc_cache(): Rate Limiter for HGNC API Requests

REST API Client

Low-level functions for interacting with the HGNC REST API

hgnc_rest_info(): Get HGNC REST API Information (Cached)
hgnc_rest_info_uncached(): Rate Limiter for HGNC API Requests
hgnc_rest_get(): Rate Limiter for HGNC API Requests
reset_rate_limiter(): Rate Limiter for HGNC API Requests

Gene Lookup and Resolution

Search for genes, resolve symbols, and extract information

hgnc_find(): Search for Genes in HGNC Database
hgnc_fetch(): Search for Genes in HGNC Database
hgnc_resolve_symbol(): Search for Genes in HGNC Database
hgnc_xrefs(): Search for Genes in HGNC Database

Batch Operations

Efficiently process lists of genes using local cache

hgnc_normalize_list(): Build Symbol Index from Cached Data
build_symbol_index(): Build Symbol Index from Cached Data

Gene Groups and Families

Discover and explore HGNC gene groups

hgnc_group_members_uncached(): Get Members of a Gene Group
hgnc_group_members(): Get Members of a Gene Group
hgnc_search_groups(): Get Members of a Gene Group

Change Tracking and Validation

Track nomenclature changes and validate gene panels

hgnc_changes(): Track Gene Nomenclature Changes
hgnc_validate_panel(): Track Gene Nomenclature Changes

MCP Server

Start and configure the Model Context Protocol server

start_hgnc_mcp_server(): Start HGNC MCP Server
check_mcp_dependencies(): Start HGNC MCP Server

MCP Resources

Resource functions for context injection

hgnc_resources: HGNC MCP Resource Helpers
hgnc_get_gene_card(): HGNC MCP Resource Helpers
hgnc_get_group_card(): HGNC MCP Resource Helpers
hgnc_get_snapshot_metadata(): HGNC MCP Resource Helpers
hgnc_get_changes_summary(): HGNC MCP Resource Helpers

MCP Prompts

Workflow templates for multi-step tasks

hgnc_prompts: MCP Prompt Helpers for HGNC Workflows
prompt_normalize_gene_list(): MCP Prompt Helpers for HGNC Workflows
prompt_check_nomenclature_compliance(): MCP Prompt Helpers for HGNC Workflows
prompt_what_changed_since(): MCP Prompt Helpers for HGNC Workflows
prompt_build_gene_set_from_group(): MCP Prompt Helpers for HGNC Workflows